Skip to main content

This page will guide you through the installation steps required to run nf-core/pixelator.

Installing Nextflow

Nextflow is distributed as a self-installing package, which means that it does not require any special installation procedure. We currently support Nextflow >=22.04.5.

For instructions on how to install Nextflow, please refer to the Nextflow installation documentation.

Installing Docker

We have tested extensively nf-core/pixelator with docker, so that is our recommended system to manage container images:

Installing other container management platforms

Install any of Apptainer/Singularity, Podman, Shifter or Charliecloud for full pipeline reproducibility.

More information can be found in the configuration options.