Data Analysis

This section contains tutorials and code examples to help you get started with MPX data analysis. We support downstream analysis in Python using pixelator together with Scanpy, and analysis in R using pixelatorR with Seurat. Each tutorial is written to be a self-contained unit of knowledge that you can use in your Data Analysis journey with MPX to answer your research questions.

Installation Requirements

Python

To complete the following sections, you will need to install pixelator as a library if you are working in Python. In order to achieve that, follow the instructions in our pixelator installation guide.

R

If you are working in R, you will need to install pixelatorR to complete the following sections. In order to achieve that, follow the instructions in our pixelatorR installation guide.