Quick Start with PNA Analysis

Step by step tutorials

1. Data Handling

   • Loading data
   • Aggregating data

2. Quality Control

   • Component filtering

3. Abundance Normalization

   • The clr normalization

4. Data Integration

   • Harmonizing data

5. Cell Annotation

   • Clustering and dimensionality reduction
   • Annotation by differential protein abundance
   • Annotation by marker gating

6. Differential Abundance

7. Spatial Analyses

   • Clustering analysis
   • Colocalization analysis

8. Cell Visualization