Quick Start with MPX Analysis

Step by step tutorials

1. Data Handling

   1. Loading data
   2. Aggregating data
   3. Save data

2. Quality Control

   1. Component filtering
   2. Removing outliers

3. Abundance Normalization

   1. The dsb normalization

4. Data Integration

   1. Harmonizing data

5. Cell Annotation

   1. Clustering and dimensionality reduction
   2. Annotation by differential protein abundance
   3. Annotation by marker gating

6. Differential Abundance

7. Spatial Analyses

   1. Differential polarity analysis
   2. Differential colocalization analysis

8. 2D Cell Visualization

   1. 2D graph visualization

9. 3D Cell Visualization